RNAseq of rim cells and retinal neuroepithelial cells of zebrafish optic cup at 18-20ss stage

This data set was generated with the aim to identify a comprehensive list of genes expressed in the rim cells and the RNE cells during zebrafish optic cup morphogenesis. GFP expressed under vsx2 locus was used as a reporter to isolate the rim cells (with low GFP expression) and retinal neuroepithelial cells (with high GFP expression). Overall design: Comparison of LowGFP (vsx2::GFP) vs HighGFP (vsx2::GFP) cells of 18-20 ss zebrafish optic cup; experiment was done in quadruplets per condition (for details, see PhD thesis J.Sidhaye: http://tud.qucosa.de/landing-page/?tx_dlf[id]=http%3A%2F%2Ftud.qucosa.de%2Fapi%2Fqucosa%253A30746%2Fmets)