five

Additional file 5 of FixNCut: single-cell genomics through reversible tissue fixation and dissociation

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Additional file 5: Table 4. This table contains the list of differentially expressed (DE) genes between fixed and fresh mouse lung samples, categorized by cell population. The test was performed using Seurat MAST, where genes with a FDR adjusted p-value < 0.05 and present in at least 10% of cells were considered as DE (see Methods). The Log2FC values indicate the direction of expression change, where positive values indicate higher expression in fixed samples and negative values indicate higher expression in fresh samples.
提供机构:
Batlle, Eduard; Butler, Lisa M.; Jensen, Kirk B.; Nieto, Juan C.; Ryan, Natalie K.; Gut, Ivo; Caratù, Ginevra; Gudiño, Victoria; Bernardes, Joana P.; Roth, Sara; Martelotto, Luciano G.; Jiménez-Gracia, Laura; Rosenstiel, Philip; Tran, Florian; Hernando-Momblona, Xavier; Plummer, Jasmine; Parish, Ian A.; van den Berge, Maarten; Kole, Tessa; van der Velde, Petra L.; Salas, Azucena; Sievers, Laura Katharina; Melón-Ardanaz, Elisa; Nawijn, Martijn C.; Heyn, Holger; Marchese, Domenica; Schreiber, Stefan; Wise, Kellie
创建时间:
2024-08-15
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