Detailed results of POWRS motif searches.
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“Target” refers to the data sets from [3]. Reference motifs are IUPAC approximations of PWMs from JASPAR (human TFs), seed sequences from miRbase (human miRNAs), or manual consensus sequences (Arabidopsis). (See Table S2 for the same data with PWMs from JASPAR shown as sequence logos.) Motifs are represented with the primary bases in uppercase and the variant bases in lowercase, with degenerate positions grouped in square brackets. Matching words are those that use at most one variant base, so [Tac]GCTGCT[Agt] = {TGCTGCTA, aGCTGCTA, cGCTGCTA, TGCTGCTg, TGCTGCTt}.
创建时间：
2015-12-02
