Data from: Population differentiation determined from putative neutral and divergent adaptive genetic markers in Eulachon (Thaleichthys pacificus, Osmeridae), an anadromous Pacific smelt.

Thaleichthys pacificus, Osmeridae RAD sequences for putative neutral SNP lociFile consists of loci name, loci sequence, and SNP location in comma delimited file.Eulachon_NeutralRADs.csvThaleichthys pacificus, Osmeridae RAD sequences from putative adaptive SNP lociFile consists of loci name, loci sequence and SNP location in comma delimited formatEulachon_AdaptiveRADS.csvThaleichthys pacificus, Osmeridae putative adaptive SNP lociThis file in genpop format and contains 193 SNPs per sample1_EulachonSig.genThaleichthys pacificus, Osmeridae putative neutral lociThis file is in genpop format and contains 3,911 SNPS per sample2_EulachonNonSig.genPaired-end extended sequences for eulachonR code to Impute missing SNP data.This code was developed by Matt Grinnell to impute missing SNPs from the eulachon datasets so it could be used by ONCOR for assignment testing.ImputeMissing.RR script to calculate effective population size with an R2 valueR script to impute missing loci by populationThaleichthys pacificus, Osmeridae key file for NCBI SRA databaseThis file contains: sample name, sample number, biosample account, library ID, and barcode.Eulachon_Key.txt