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Virulence and antibiotic resistance plasticity of Arcobacter butzleri: insights on the genomic diversity of an emerging human pathogen (genome assembly, annotation dataset, core- and pan-genome loci)

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Zenodo2020-07-30 更新2026-06-04 收录
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This dataset refers to the analysis of 49 <em>Arcobacter butzleri</em> genomes and includes the assembled contigs (.fasta and .gbk files), the nucleotide sequences of the predicted transcripts (CDS, rRNA, tRNA, tmRNA, misc_RNA) (.ffn files), the respective amino acid sequences of the translated CDS sequences (.faa files), the nucleotide alignments of all the 1165 core-genome loci, the nucleotide alignments of the genes <em>hecA</em>, <em>tetR </em>and <em>porA</em>, the categorized amino acid sequences of the six hypervariable regions of PorA, and the nucleotide sequences of the first allele of each of the 7474 pan-genome loci with the respective complete allelic profile matrix. All raw sequence reads used in this study were deposited in the European Nucleotide Archive (ENA) (BioProject PRJEB34441).

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Zenodo
创建时间:
2019-09-19
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