Addressing the pervasive scarcity of structural annotation in eukaryotic algae
收藏DataCite Commons2025-05-01 更新2025-04-16 收录
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https://data.mendeley.com/datasets/b32nw6rrfh
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资源简介：
[Description]
Predicted gene sets using Braker-EP and Braker-ES for
(i) unannotated_135.tar.gz: 135 eukaryotic algal genome assemblies without structural annotations
(ii) qualified_45.tar.gz: 45 high-quality eukaryotic algal genome assemblies used for benchmark
(iii) published_genome_sequences: 210 publicly available genome sequences (nucleotide fasta) used in this study.
[Instruction]
(i) Decompress the compressed files
tar -xvzf unannotated_135.tar.gz
tar -xvzf qualified.tar.gz
(ii) Find the files you want
gff3-formatted structural annotation = GENOME_IDENTIFIER.BRAKER_METHOD_USED.gff
coding sequence nucleotide fasta = GENOME_IDENTIFIER.BRAKER_METHOD_USED.cds.fna
protein sequence fasta = GENOME_IDENTIFIER.BRAKER_METHOD_USED.faa
[Disclosure]
This data was cleared for public release by the Los Alamos National Laboratory (LA-UR-21-30120).
提供机构：
Mendeley Data
创建时间：
2023-01-23
