five

Transcriptional difference of deep sea microorganisms under different sampling methods

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NIAID Data Ecosystem2026-05-02 收录
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https://zenodo.org/record/13381951
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This dataset comprises the non-rRNA metatranscriptome and Metagenomic Assembled Genomes (MAGs) utilized in the research project titled "Transcriptional Differences of Deep Sea Microorganisms Under Different Sampling Methods." The version 1 of this dataset includes non-rRNA metatranscriptome and sequence of MAGs. The non-rRNA metatranscriptome includes a total of 20 FASTQ files, which consist of both forward and reverse sequences. These files are categorized into the following groups: MIS1-clean, MIS2-clean, MIS3-clean, MIS4-clean, MIS5-clean, MIS6-clean, NIS1-clean, NIS2-clean, ISMF-clean, and ISMU-clean. The MAGs dataset contains all MAGs generated during the research. The version 2 of this dataset includes a comprehensive table that provides quality metrics for the MAGs, including information on completeness, contamination, total assembly length, and the number of contigs. Additionally, version 2 datasets includes files ending with .faa that contain the amino acid sequences for each MAG, as well as files ending with .txt specifically contain the annotation information for each MAG based on alignment with the KEGG database.
创建时间:
2024-11-30
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