Global Fungal Proteins

NIAID Data Ecosystem2026-03-14 收录

真菌蛋白组学

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数据链接：

https://figshare.com/articles/dataset/Global_Fungal_Proteins/20173601 数据链接链接失效反馈

官方服务：

资源简介：

FASTA file of fungal proteins present in the refined Global database. Used to analyze the results of searching the Global database.

创建时间：

2023-01-13

Dayhoff-MMseqs2

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序列比对

该数据集包含原始Dayhoff Atlas中的GigaRef和UniRef50数据集，并将其转换为适合MMseqs2 CPU和GPU工具使用的格式。原始Atlas的训练集、验证集和测试集被合并，提供以下数据集：GigaRef No Singletons（无单例簇的GigaRef数据集）、GigaRef Singletons（仅含单例簇的GigaRef数据集）、GigaRef Full（包含所有序列

Hugging Face2026-08-28 更新90

Source code: build PLMSearch & PLMAlign locally and reproduce experiments.

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蛋白质序列比对

Source code: PLMSearch, PLMAlign, and related tutorials are freely available to the public. For reproducibility, code to regenerate the main and supplementary results and figures have also been deposi

Figshare2024-03-31 更新20

Tryptic peptide ion masses, position corresponding to the mature protein, and the corresponding amino acid sequences translated (GenBank ELR07576.1) from the P . destructans gene matched to PdSP1 (27.9 kDa protein).

真菌蛋白组学

白鼻综合征病原蛋白

1Four peptides are common with a homologue PdSP2 (GenBank ELR03877.1). 2 Peptide ions observed experimentally only. Only peptide ions with a mass greater than m/z 800 are included. (Theoretical trypti

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Additional file 5 of From simple and specific zymographic detections to the annotation of a fungus Daldinia caldariorum D263 that encodes a wide range of highly bioactive cellulolytic enzymes

纤维素酶

真菌蛋白组学

Additional file 5: Table S4. Identified D263 proteins from the CMCase activity bands Endo1–Endo4.

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Performance comparison of fast search and normal search on databases of different sizes for the GramNeg_1444 data set.

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算法评估

*Experiment results based on normal search are shown in parentheses.

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