Tree_Files

-Astral_Bootstrap.tre newick formatted 100 bootstrap replicates from the COMPLETE ASTRAL-II species analysis -Gene_Trees_Full.tre newick formatted 498 "best" gene trees from RAxML (in ascending order) -Gene_Trees_Reduced.tre newick formatted reduced 354 "best" gene trees form RAxML (in ascending order) -Individual_Trees.tre newick formatted trees based on 326 sequences to check for monophyly -RAxML_Bootstrap.tre -neewick formatted bootstrap replicates from the RAxML species analysis -Species_Trees_Complete.tre newick formatted species trees (ASTRAL-II and SVDquartets) with support values for all 65 taxa, 498 loci (COMPLETE dataset) -Species_Trees_Consensus.tre newick formatted species trees generated using the CONSENSUS dataset -Species_Trees_OnePer.tre newick formatted species trees generated using the ONEPER dataset -Species_Trees_Reduced.tre newick formatted species trees with support values for REDUCED set of 60 taxa, 354 loci -Species_Trees_Schnitzler.tre newick formatted species trees with species and data from Schnitzler et al. included (AUGMENTED dataset) -SVD_bootstrap.tre newick formatted 100 bootstrap replicates from the SVDquartets species analysis