Additional file 1 of Genome-wide identification and characterization of NBS-encoding genes in Raphanus sativus L. and their roles related to Fusarium oxysporum resistance

Additional file 1: Table S1. Information regarding the radish NBS-LRR genes. Table S2. Clusters of radish NBS-LRR genes. Table S3 Predicted promoter elements of NBS-encoding genes in the radish genome. Table S4.Analysis and distribution of conserved motifs in radish CNL and TNL proteins. Table S5. MEME analysis of the CNL and TNL proteins. Table S6. Tandem arrays of the radish NBS-LRR genes. Table S7. Segmentally duplicated radish NBS-LRR genes. Table S8. Ka/Ks values for the segmentally duplicated genes in the radish genome. Table S9. Segmentally duplicated NBS-LRR genes in the radish/A. thaliana, radish/B. oleracea, and radish/B. rapa genomes. Table S10. Common segmentally duplicated NBS-LRR genes in the radish/A. thaliana, radish/B. oleracea, and radish/B. rapa genomes. Table S11. Ka/Ks values between radish and three related plant species. Table S12. The information for gene structure and domain change of radish/A. thaliana, radish/B. oleracea, and radish/B. rapa genomes. Table S13. The resistance of radish lines to F. oxysporum f. sp. Raphani 59. Table S14. The summary of the RNA-Seq database. Table S15. Details regarding the qRT-PCR primers. Table S16. The transcriptome data of the radish lines after inoculated with F. oxysporum f. sp. Raphani 59 (XLSX 15325 kb)