Transcriptomic Analysis of the Head Kidney in Larimichthys crocea at Different Stages of Nocardia seriolae Infection

Larimichthys crocea, one of the most economically valuable marine fish species in China, suffers significant economic losses in aquaculture due to infectious diseases caused by marine pathogens, such as Nocardia seriolae. The pathogenic mechanisms underlying N. seriolae infection in L. crocea, as well as the host immune responses, remain inadequately characterized. To investigate the molecular mechanisms of this infection, we conducted transcriptome sequencing on the head kidney tissues of L. crocea at 1, 3, 7, and 14 days post-infection with N. seriolae. In total, 421, 1052, 3215, and 2459 upregulated genes, along with 1853, 1777, 3718, and 3134 downregulated genes were identified, respectively. KEGG enrichment analysis revealed that differentially expressed genes were predominantly associated with immune and metabolic pathways. Notably, pathways involved in Toll-like receptor signaling, ECM-receptor interaction, cytokine-cytokine receptor interaction, and focal adhesion were significantly enriched, highlighting an immune response to N. seriolae infection in L. crocea. In addition, significant enrichment of the TCA cycle and Oxidative phosphorylation pathways in metabolic processes suggests an upregulated ATP synthesis to meet the heightened energy demand associated with the immune response to infection. These findings contribute to a deeper understanding of the immune defense mechanisms in the head kidney of L. crocea against N. seriolae infection and elucidate aspects of N. seriolae pathogenicity.