Gammarid transcript annotations

We sequenced the transcriptomes of a male individual and a female individual for seven different taxonomical groups: <i>Gammarus fossarum A, G. fossarum B, G. fossarum C</i>, <i>Gammarus wautieri</i>, <i>Gammarus pulex</i>, <i>Echinogammarus berilloni</i> and <i>Echinogammarus marinus</i>. For each sample the transcripts were annotated using the Trinotate annotation pipeline43. Swissprot database was used as main database and Amphipods proteins referenced on Uniref were used as custom database. Blastx and Blastp were used for the similarity search step with an e-value cutoff set at 1e-2. Blast results were then used for generate the annotation report with the same e-value cutoff.