Addressing the pervasive scarcity of structural annotation in eukaryotic algae

[Description]
Predicted gene sets using Braker-EP and Braker-ES for
(i) unannotated_135.tar.gz: 135 eukaryotic algal genome assemblies without structural annotations
(ii) qualified_45.tar.gz: 45 high-quality eukaryotic algal genome assemblies used for benchmark
(iii) published_genome_sequences: 210 publicly available genome sequences (nucleotide fasta) used in this study.

[Instruction]
(i) Decompress the compressed files
tar -xvzf unannotated_135.tar.gz
tar -xvzf qualified.tar.gz

(ii) Find the files you want
gff3-formatted structural annotation = GENOME_IDENTIFIER.BRAKER_METHOD_USED.gff
coding sequence nucleotide fasta = GENOME_IDENTIFIER.BRAKER_METHOD_USED.cds.fna
protein sequence fasta = GENOME_IDENTIFIER.BRAKER_METHOD_USED.faa

[Disclosure]
This data was cleared for public release by the Los Alamos National Laboratory (LA-UR-21-30120).