Additional file 2 of Tracking the dissemination of Erwinia amylovora in the Eurasian continent using a PCR targeted on the duplication of a single CRISPR spacer

Additional file 2: Table S1. List of 82 genomes used for initial genotyping of the CRISPR repeat regions (Bühlmann 2015). The CRR1 genotype was marked in column A and color-coded according to the affiliation to the corresponding archetypal genotype. Table S2. List of isolates analyzed in this work and result of the PCR targeting the duplication of spacer 1029 (column A). Whenever the complete genome was available (*) the CRR1 genotype (Rezzonico et al. 2011) was reported and color-coded according to the affiliation to the corresponding archetypal genotype. Table S3. Distribution of isolates belonging to the A-derived, D-derived and PCR null genotypes in the countries analyzed in this work. Table S4. Comparison of the VNTR profiles between genome-sequenced isolates displaying the A-derived and the D-derived genotype (Bühlmann et al. 2014). Empty cells indicate missing microsatellite.