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Primate population transcriptomic data

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Figshare2021-06-15 更新2026-04-08 收录
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https://figshare.com/articles/dataset/Primate_population_transcriptomic_data_for_estimating_synonymous_and_non-synonymous_diversity_in_10_primate_species_/14784888/2
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Population transciptomic data for 10 primate species used in Brevet and Lartillot, 2021 to get estimates of synonymous and non-synonymous diversity. <br>The data are originally from Perry et al (2012), such as re-formatted, re-analysed by Romiguier et al (2014) and Figuet et al (2016). See README.txt for more information about how to run the scripts on these data.<br>Brevet M and Lartillot N 2021. Reconstructing the history of variation in effective population size along phylogenies. https://www.biorxiv.org/content/10.1101/793059v4.<br>Perry, G. H., Melsted, P., Marioni, J. C., Wang, Y., Bainer, R., Pickrell, J. K., Michelini, K., Zehr, S., Yoder, A. D. et al. 2012 Comparative RNA sequencing reveals substantial genetic variation in endangered primates. Genome Res., 22(4), 602-610.<br>Romiguier, J., Gayral, P., Ballenghien, M., Bernard, A., Cahais, V., Chenuil, A., Chiari, Y., Dernat, R., Duret, L. et al. 2014 Comparative population genomics in animals uncovers the determinants of genetic diversity. Nature, 515(7526), 261-263.<br>Figuet, E., Romiguier, J., Dutheil, J. Y. &amp; Galtier, N. 2014 Mitochondrial DNA as a tool for reconstructing past life-history traits in mammals. J. Evol. Biol., 27(5), 899-910.<br><br>
提供机构:
Lartillot, Nicolas; Brevet, Mathieu
创建时间:
2021-06-15
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