Additional file 9 of In-depth characterization of food and environmental microbiomes across different meat processing plants

Supplementary Material 9: Supplementary Table 2. Genomes added to PlusPF database. GTDB-tk name is indicated if it is different from current name (according to NCBI). Kraken2:taxid column indicates the NCBI taxid for those genomes that initially failed to be correctly build in the database (fasta headers were change to add |kraken2:taxid|XXX to allow kraken2 to recognize the taxa of the genome). Finally, those genomes with missed FTP path were manually downloaded from NCBI by searching the Assemly Accession.