Diel multi 'omics data from surface ocean microbial community samples collected during Hawaiʻi Diel Sampling (HaDS) in Kāneʻohe Bay and adjacent offshore waters of Oʻahu, Hawaiʻi from December 2020 to August 2021
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<p>Related Data:<br /> <br /> NCBI Project ID <a href=\"https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA1201851\" target=\"_blank\">PRJNA1201851</a> offers access to all raw data for short-read and long-read metagenomes, as well as metatranscriptomes and transfer RNA (tRNA) transcripts.<br /> <br /> doi:<a href=\"http://doi.org/10.6084/m9.figshare.28784717\" target=\"_blank\">10.6084/m9.figshare.28784717</a> serves anvi’o contigs-db files for the individual co-assemblies of short-read (SR) as well as long-read (LR) sequencing of metagenomes. Please note that an anvi’o contigs-db includes gene calls, functional annotations, HMM hits, and other information about each contig, and you can always use the program anvi-export-contigs to get a FASTA file for sequences. <br /> <br /> doi:<a href=\"http://doi.org/10.6084/m9.figshare.28784762\" target=\"_blank\">10.6084/m9.figshare.28784762</a> serves FASTA files for metagenome-assembled genomes (MAGs) we have reconstructed from short-read and long-read sequencing of the metagenomes. They are the outputs of quite a preliminary effort, thus secondary attempts to recover genomes from the co-assemblies are most welcome (and very much encouraged). Please see the Supplementary Table for taxonomic annotation and completion/redundancy estimates of the MAGs.<br /> <br /> doi:<a href=\"http://doi.org/10.6084/m9.figshare.28784765\" target=\"_blank\">10.6084/m9.figshare.28784765</a>. The EcoPhylo output that describes the phylogeography of ribosomal protein L14 (https://anvio.org/help/main/workflows/ecophylo/).<br /> <br /> See more about related data and code at https://merenlab.org/data/hads/</p>



