Popgen Stats from Hufford et al. 2012 Nat. Gen.
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下载链接：
https://figshare.com/articles/dataset/Gene_Popgen_Stats_from_Hufford_et_al_2012_Nat_Gen_/746968
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资源简介：
Summary statistics for 10kb windows genome-wide and for genes in the maize v2 filtered gene set. Data are from Hufford et al. 2012:
http://www.nature.com/ng/journal/v44/n7/full/ng.2309.html
See details in the paper for criteria for calling SNPs, data used for statistics, etc.
Columns are:
locus: GRM name of gene in the filtered gene set
S: number of Segregating sites
ThetaW: Watterson's estimate of theta (per locus)
ThetaPi: nucleotide diversity (per locus)
ThetaH: Fay and Wu (2000) estimator (per locus)
TajD: Tajima's D
seqbp: # of bp sequenced. this should be used as the denominator to calculate per bp. values of the above statistics.
创建时间：
2013-07-27
