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Dataset for the annotations of the transcriptome of the hemp cultivar C. sativa ‘Finola’ (finola1) and the marihuana cultivar C. sativa ‘Purple Kush’

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4TU.ResearchData2020-10-21 更新2026-04-23 收录
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https://data.4tu.nl/articles/_/13121885
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资源简介:
This dataset contains the annotations of the two transcriptomes of the hemp cultivar C. sativa ‘Finola’ (finola1) and the marihuana cultivar C. sativa ‘Purple Kush’, aligned to the C. sativa ‘Purple Kush’ (canSat3 version GAC 000230575.1) assembly from the C. sativa Genome Browser Gateway http://genome.ccbr.utoronto.ca/cgi-bin/hgGateway (van Bakel et al., 2011).The annotations were performed using Local Blast and the data is provided in gff files. Gff means General Feature Format and it's a simple tab-delimited text file for describing genomic features. The files are ready to be uploaded in a genomic viewer.<br>

本数据集包含工业大麻品种*Cannabis sativa* ‘Finola’(finola1)与大麻品种*Cannabis sativa* ‘Purple Kush’的两份转录组注释信息。所有注释序列均比对至来自大麻基因组浏览器网关(http://genome.ccbr.utoronto.ca/cgi-bin/hgGateway,van Bakel等,2011年)的*C. sativa* ‘Purple Kush’基因组组装版本canSat3(GAC 000230575.1)。本数据集的注释工作采用局部BLAST工具完成,数据以gff文件格式提供。GFF(General Feature Format,通用特征格式)是一种以制表符分隔的简单文本文件,用于描述基因组特征,上述文件可直接上传至基因组可视化查看器中使用。
提供机构:
Pedró, Jordi Petit; Denneboom, Christel; M. Trindade, Luisa; M. J. Salentijn, Elma
创建时间:
2020-10-21
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