The Coffee Genome Hub: a resource for coffee genomes

The Coffee Genome Hub is an integrated web-based database providing centralized access to coffee community genomics, genetics and breeding data and analysis tools to facilitate basic, translational and applied research in coffee. Data available are the complete genome sequence of C. canephora along with gene structure, gene product information, metabolism, gene families, transcriptomics (ESTs, RNA-Seq), genetic markers and genetic maps. The hub provides also tools for easy querying, visualizing and downloading research data. It is being built using the open-source Tripal database infrastructure. It is developed by IRD and Cirad and supported by the South Green Bioinformatics platform.咖啡基因组数据库（Coffee Genome Hub）是一款集成化网页端数据库，旨在为咖啡领域科研共同体提供基因组学、遗传学与育种数据的集中式访问渠道，以及配套分析工具，以推动咖啡领域的基础研究、转化研究与应用研究。该数据库涵盖刚果咖啡（Coffea canephora）的全基因组序列，以及基因结构、基因产物信息、代谢数据、基因家族、转录组学数据（表达序列标签（ESTs）、RNA测序（RNA-Seq））、遗传标记与遗传图谱等数据集。此外，该数据库还提供便捷的查询、可视化与科研数据下载工具。其基于开源Tripal数据库框架搭建，由法国发展研究院（IRD）与国际农业研究与发展合作中心（Cirad）联合开发，并由南绿生物信息学平台（South Green Bioinformatics platform）提供支持。