Additional file 3 of NetAct: a computational platform to construct core transcription factor regulatory networks using gene activity

Additional file 3: Supplementary tables: Table S1. Summary of the transcription factor (TF)-target databases for both human and mouse genomes. Table S2. Summary of the publicly available gene expression data sets for benchmarking TF-target gene set databases. Table S3. Sign correction for network construction and modeling. Table S4. Predicted driver TFs from network modeling of the EMT network and experimental evidences from the literature.