16S tag data, metagenomic data, and a draft assembled genome of Altermonas macleodii derived from laboratory-maintained Trichodesmium erythraeum cultures
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<p>These data are all derived from laboratory-maintained Trichodesmium erythraeum cultures and contain 16S tag data, metagenomic data, and a draft assembled genome of Altermonas macleodii.</p>
<p>3 DNA sequence datasets have been uploaded to NCBI in their appropriate locations. The accession information is presented here:</p>
<p>FastQ files of 16S rRNA amplicon data have been uploaded to NCBI’s Sequence Read Archive (SRA) under accession number SRP078329.</p>
<p>FastQ files of 5 metagenomic sequence datasets have been deposited in NCBI’s SRA under SRP078343.</p>
<p>A FastA file of a draft genome has been uploaded to NCBI’s Whole Genome Shotgun (WGS) database under the accession MBSN00000000.</p>
<p>These datasets were released upon publication of the paper: <em>The Trichodesmium consortium: conserved heterotrophic co-occurrence and genomic signatures of potential interactions</em>, by Lee et al. (doi:<a href=\"http://dx.doi.org/10.1038/ismej.2017.49\" target=\"_blank\">10.1038/ismej.2017.49</a>), published in April 2017. Detailed sample information is included in the supplemental spreadsheets to that publication, specifically tables S1 and S2. </p>
<p>These data were also utilized in the paper:<br />
Walworth, N. G., Lee, M. D., Suffridge, C., Qu, P., Fu, F., Saito, M. A., ... & Hutchins, D. A. (2018). Functional genomics and phylogenetic evidence suggest genus-wide cobalamin production by the globally distributed marine nitrogen fixer Trichodesmium. <em>Frontiers in Microbiology</em>, <em>9</em>, 189. doi: <a href=\"https://doi.org/10.3389/fmicb.2018.00189\" target=\"_blank\">10.3389/fmicb.2018.00189</a></p>
创建时间:
2022-04-15



