Additional file 4: Table S3. of Cribriform and intraductal prostate cancer are associated with increased genomic instability and distinct genomic alterations

Gene-wise copy number alterations associated with CR/IDC growth using a ≥ 30% CR/IDC threshold to stratify samples. Columns contain: Symbol – official gene symbol, Chromosome / Start / End – genomic coordinates of gene locus, FDR – Boschloo’s exact test p-value after correcting for multiple tests using the Benjamini–Hochberg procedure. amplifications_case – number of CR/IDC positive samples with an amplification spanning gene locus, amplifications_control – number of control samples with an amplification spanning gene locus, cases – total number of CR/IDC positive samples, controls – total number of control samples. All entries are sorted by genomic location. Deletions are presented in the same format and listed separately. (XLS 161 kb)