Rattus norvegicus (Rat Jul. 2014 RGSC 6.0/rn6)

High confidence set 364 tRNAs decoding standard 20 AA 363 Selenocysteine tRNAs (TCA) 1 Notable atypical predictions Anticodon/isotype mismatch 21 Other tRNA-like predictions Primary filter (tRNAscan-SE pseudogenes) 198126 Secondary filter (low feature scores, possible rep. element) 12605 Tertiary filter (excessive isotype copies, possible rep. element) 51 Arg TCT 5 Leu CAA 3 Ile TAT 3 Tyr GTA 3 Isotype tRNA Count by Anticodon Total Ala AGC 31 GGC CGC 3 TGC 7 41 Gly ACC GCC 11 CCC 5 TCC 9 25 Pro AGG 8 GGG CGG 3 TGG 6 17 Thr AGT 7 GGT CGT 4 TGT 5 16 Val AAC 6 GAC CAC 6 TAC 3 15 Isotype tRNA Count by Anticodon Total Ser AGA 9 GGA CGA 3 TGA 4 ACT GCT 11 27 Arg ACG 6 GCG CCG 3 TCG 5 CCT 7 TCT 6 27 Leu AAG 6 GAG CAG 10 TAG 3 CAA 3 TAA 2 24 Isotype tRNA Count by Anticodon Total Phe AAA GAA 8 8 Asn ATT GTT 13 13 Lys CTT 11 TTT 6 17 Asp ATC GTC 15 15 Glu CTC 9 TTC 10 19 His ATG GTG 10 10 Gln CTG 10 TTG 5 15 Isotype tRNA Count by Anticodon Total Ile AAT 8 GAT CAT TAT 3 11 iMet/Met CAT 8/5 13 Tyr ATA GTA 3 3 Supres TCA CTA TTA 0 Cys ACA GCA 40 40 Trp CCA 7 7 SelCys TCA 1 1