Supplemental Data to PhD Dissertation entitled "Non-Coding and Epigenetic Regulators of Ambient Temperature Sensitive Flowering"

Supplemental Data to the PhD dissertation entitled "Non-Coding and Epigenetic Regulators of Ambient Temperature Sensitive Flowering" from Suze Blom, Wageningen University & Research (doi:10.18174/670822). Supplementary data to the chapter entitled "Ambient temperature dependent changes in DNA methylation in Arabidopsis thaliana Col-0 and the decrease in DNA methylation 1 mutant" [manuscript in preparation]

Includes Supplemental Data:

Supplementary Data 1: Significantly differently expressed (DE) genes in Col-0 after the 24 hour ambient temperature switch from 16°C to 25°C. padj value of 0.05 was set as the cutoff value for statistical significance.

Supplementary Data 2: Significantly differently expressed (DE) genes in ddm1-10 after the 24 hour ambient temperature switch from 16°C to 25°C. padj value of 0.05 was set as the cutoff value for statistical significance.

Supplementary Data 3: Alternative splicing (AS) of transcripts after an ambient temperature change from 16°C to 25°C in Col-0. Gene ID, splicing event, genomic location, AS frequency and padj values are indicated.

Supplementary Data 4: Alternative splicing (AS) of transcripts after an ambient temperature change from 16°C to 25°C in ddm1-10. Gene ID, splicing event, genomic location, AS frequency and padj values are indicated.

Supplementary Data 5: List of genes in Col-0 (sheet 1) and ddm1-10 (sheet 2) with both significant AS and DMC associated with them. Gene ID and number of DMCs associated with the gene are indicated.