Additional file 2 of Large scale study of anti-sense regulation by differential network analysis

Change motifs enrichment. Results of the enrichment analysis of the 308 change motifs from the 60DAH experiment. Columns A to D: apple genes, nodes of the change motif. Column E: GO slim category significantly over-represented by the genes present in the change motif (“No enrichment” if there is no significantly over-represented category). Column F: significant p-value below 0.05 (-1 if no enrichment). Column G: Apple genes from the sample tagged with the GO slim category. Column H: Number of apple genes in the genome. Column I: Number of apple genes in the sample. Column J: Number of apple genes from the genome tagged with the GO slim category. Column K: Number of apple genes from the sample tagged with the GO slim category. Columns L to O: Arabidopsis orthologs of the apple genes of the change motif. Column P: Arabidopsis orthologs of the apple genes from the sample tagged with the GO category. (ODS 34 kb)