Data from: Using Pool-seq to search for genomic regions affected by hybrid inviability in the copepod T. californicus
收藏Mendeley Data2024-06-25 更新2024-06-27 收录
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https://datadryad.org/stash/dataset/doi:10.5061/dryad.r3v52
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Genotypes for individual F2 hybridsGenotypes for F2 hybrids from crosses between the San Diego (SD) and Abalone Cove (AB) populations of the copepod Tigriopus californicus. Individuals were genotyped at 14 PCR based markers across the 12 chromosomes. AB refers to the AB homozygous genotype, SD is homozygous SD and H refers to heterozygotes.Genotypes.xlsxAllele frequency per SNP for F2 hybridsAllele frequencies per SNP from Pool-seq data of F2 hybrids between the San Diego (SD) and Abalone cove (AB) populations of the copepod Tigriopus californicus. Allele frequencies are in reference to the AB population. Nauplii_AF refers to the allele frequency for the nauplii dataset; Adult_AF refers to the allele frequency for the adults dataset.DAN_DAA_all_chrm_AF.txtAllele frequency for F2 hybrids after sliding window averaging of 500 SNPAllele frequencies from Pool-seq data of F2 hybrids between the San Diego (SD) and Abalone cove (AB) populations of the copepod Tigriopus californicus. Allele frequencies are the average allele frequency of 500 consecutive SNP. Allele frequencies are in reference to the AB population. Position is the SNP position for the last SNP in the averaged window. Nauplii_AF refers to the allele frequency for the nauplii dataset; Adult_AF refers to the allele frequency for the adults dataset.DAN_DAA_slwin500.txtAllele frequency for F2 hybrids after sliding window averaging of 1000 SNPAllele frequencies per SNP from Pool-seq data of F2 hybrids between the San Diego (SD) and Abalone cove (AB) populations of the copepod Tigriopus californicus. Allele frequencies are the average allele frequency of 1000 consecutive SNP. Allele frequencies are in reference to the AB population. Position is the SNP position for the last SNP in the averaged window. Nauplii_AF refers to the allele frequency for the nauplii dataset; Adult_AF refers to the allele frequency for the adults dataset.DAN_DAA_slwin1000.txtAllele frequency for F2 hybrids after sliding window averaging of 2000 SNPAllele frequencies per SNP from Pool-seq data of F2 hybrids between the San Diego (SD) and Abalone cove (AB) populations of the copepod Tigriopus californicus. Allele frequencies are the average allele frequency of 2000 consecutive SNP. Allele frequencies are in reference to the AB population. Position is the SNP position for the last SNP in the averaged window. Nauplii_AF refers to the allele frequency for the nauplii dataset; Adult_AF refers to the allele frequency for the adults dataset.DAN_DAA_slwin2000.txtAllele frequency for F2 hybrids after sliding window averaging of 3000 SNPAllele frequencies per SNP from Pool-seq data of F2 hybrids between the San Diego (SD) and Abalone cove (AB) populations of the copepod Tigriopus californicus. Allele frequencies are the average allele frequency of 3000 consecutive SNP. Allele frequencies are in reference to the AB population. Position is the SNP position for the last SNP in the averaged window. Nauplii_AF refers to the allele frequency for the nauplii dataset; Adult_AF refers to the allele frequency for the adults dataset.DAN_DAA_slwin3000.txt
创建时间:
2023-06-28



