Additional file 5 of Using expression data to fine map QTL associated with fertility in dairy cattle

Additional file 5: Table S4. Title: Percentage of variants with a direction of effect on fertility that is consistent in Australia and New Zealand, for New Zealand traits measured as heifer (sheet 1) and during lactation 2 (sheet 2). Description: Trait = New Zealand fertility phenotype, agepub = age at puberty, co3wk/co6wk/co9wk/co12wk = pregnancy rate at 3/6/9/12 weeks, ppai = Prolonged postpartum anovulatory intervals, ppaicens = ppai censored, preg = pregnancy rate, sm3wk/sm6wk = submission rate at 3/6 weeks, tstai1 = time from planned start of mating to 1st AI, tstconc = time from planned start of mating to conception, ttai1 = time from calving to 1st AI, ttconc = time to conception, conccens = ttconc censored, ALL = all variants included in the study, CI = variants significantly associated (p ≤ 10-6) with calving interval in Australia, CI+GE/CI+EE/CI+SPLICE/CI+ASE = variants significantly associated (p ≤ 10-6) with calving interval in Australia and gene expression/exon expression/gene splicing/allele specific expression in New Zealand.