These are the supplementary files of the article "Genome Wide Association Study on Reproductive Traits Using Imputation-Based Whole-Genome Sequence Data in Yorkshire Pigs".
This table presents the number of positive detection via associated markers of each simulated QTL using the mlmm method, out of 10 replicates for both simple and complex traits and for structured and
Major (D) and minor (d) alleles were shown in the Alleles column. The major SNP allele frequency in cases and controls were indicated in the F_A and F_U columns, respectively. OR represents the odds r
Additional file 1: Supplementary Note. Figure S1. Distribution of genotyped SNPs across genomic regions. Figure S2. Distribution of genotyped SNPs per chromosome. Figure S3. Distribution of sampled an
