Additional file 4 of Characterizing chromatin interactions of regulatory elements and nucleosome positions, using Hi-C, Micro-C, and promoter capture Micro-C

Additional file 4: Table S3. Chromatin loops identified from this study. (A) summary table of loops called using Mustache (B) summary table of loops called using SIP (C) summary table of loops called using HiCCUPS (D) summary table of loops called using Chicago (E) summary table of neoloops and structural variants called using NeoLoopFinder (F) genomic coordinates of loops found from Hi-C 1 billion data (G) genomic coordinates of loops found from Micro-C 1 billion data (H) genomic coordinates of loops found from Micro-C 2 billion data (I) genomic coordinates of loops found from Micro-C 3 billion data (J) genomic coordinates of loops found from promoter capture Micro-C data (K) genomic coordinates of structural variants and neoloops found from Hi-C 1 billion data (L) genomic coordinates of structural variants and neoloops found from Micro-C 1 billion data (M) genomic coordinates of structural variants and neoloops found from Micro-C 2 billion data (N) genomic coordinates of structural variants and neoloops found from Micro-C 3 billion data.