Quantitative cell morphology reveals fate-coupled regulation of cell size in <i>C. elegans</i> embryo
收藏资源简介：
These are the links for accessing the data, code, and software in the paper "Quantitative cell morphology reveals fate-coupled regulation of cell size in C. elegans embryo". 1. The ITK-SNAP-CVE in Windows/Mac/Linux versions is deposited on figshare. 2. The data of 8 uncompressed wild-type embryos, 4 uncompressed RNAi-treated embryos, and 17 compressed wild-type embryos for ITK-SNAP-CVE is deposited on https://portland-my.sharepoint.com/:f:/g/personal/zelinli6-c_my_cityu_edu_hk/EibhRok6qa9Mh7wLJN7AS90Bv-HZaQhKk9ZvJ6W8xd-5IQ?e=Ug55xP. 3. The zipped code for CMap is deposited on: https://portland-my.sharepoint.com/:u:/g/personal/zelinli6-c_my_cityu_edu_hk/Ec3zXvxQnLBJrNLFWcSfaCMBME_JNPYhJWIUCgQfIYmPPA?e=Ma8ben. 4. The online code for CMap is deposited on: https://colab.research.google.com/drive/13F2R7HzMra8_CWsaD3FYNnt-GdzD1Tpy?usp=sharing. 5. The manually annotated ground truth for training is deposited on: https://portland-my.sharepoint.com/:u:/g/personal/zelinli6-c_my_cityu_edu_hk/EQiw8h6UaPVOkmGmHc3NkSoBTCTzJ73LHhDvCSbSPzuvPw. 6. The manually annotated ground truth for evaluation is deposited on: https://portland-my.sharepoint.com/:f:/g/personal/zelinli6-c_my_cityu_edu_hk/EkQ7XeS_kEJBopUIyKhtw4YBX4bNfkneboK13ETN0nfukg?e=nBQGIo. 7. The manually annotated ground truth for apoptotic cells is deposited on: https://portland-my.sharepoint.com/:f:/g/personal/zelinli6-c_my_cityu_edu_hk/Emm1F1EnAg1OuxwK0Os22n8B1OrwGT8Sbfs8oYtq46HirQ?e=2XQXeg. Please contact Guoye Guan (guanguoye@gmail.com), Zelin Li (zelinli6-c@my.cityu.edu.hk), and Yiming Ma (20482302@life.hkbu.edu.hk) if there are any questions.
