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RNA-seq analysis to assess rRNA depletion of archaeal total RNA samples.
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创建时间：
2025-02-05
相关数据集
Fraction of rRNA in RNA-Seq of multiple bacterial species, in which rRNA were removed by the RiboRid method.
% indicates the fraction of rRNA reads of all mapped reads of the genome
NIAID Data Ecosystem90
A simple, cost-effective, and robust method for rRNA depletion in RNA-sequencing studies. A simple, cost-effective, and robust method for rRNA depletion in RNA-sequencing studies
These experiments were designed to quantify depletion of rRNA sequencing reads from bacterial RNA-seq libraries and verify that mRNA sequencing reads were not altered. Specifically, we tested an rRNA
NIAID Data Ecosystem70
Supplemental Material for Telzrow et al., 2021
Figure S1 contains a depth of coverage plot of the mitochondrial rRNA genes. Figures S2, S3, and S4 display scatterplot visualizations of rRNA depletion specificity summarized in Figures 2, 3, and 4,
DataCite Commons2021-08-20 更新60
Salmonella enterica subsp. enterica strain:SL1344 Transcriptome or Gene expression. Salmonella enterica subsp. enterica strain:SL1344
Comparison of three rRNA removal kits.
NIAID Data Ecosystem80
PUF3 RIP and rRNA depletion control. PUF3 RIP and rRNA depletion control
Cells expressing Tap-Tagged PUF3 were used for selection on IgG beads, then released using TEV protease. Samples were input and bound fraction without rRNA removal, and unbound fraction and input afte
NIAID Data Ecosystem60
