five

diversity_around_substitutions.tar

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[5 files]. Nucleotide diversity (pi) and divergece (dx) for each 4D site. The "distToNearest" files give, for each 4D site, the distance to the nearest substitution, either synonymous or nonsynonymous. For synonymous substitutions, the there are 100 bootstrapped distances, obtained by subsampling sysnonymous substitutions. There are distance files for two groups of substitutions, identified using different outgroups, as described in the text.
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2016-04-22
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