MPRA processed data: Oligodendroglia as functional effectors of Multiple Sclerosis risk Single Nucleotide Polymorphisms

Processed data files from MS risk SNPs in hOPCs and Bcells in massive parallel reporter assays (MPRA) from Carlström et al. Files include associated barcodes per regulatory element and DNA and RNA count tables. (GRCh38) MPRA1 CRS design fasta: CRS_FINAL221208_wo_overhangs_corrected.fa MPRA1 CRS labels (FWD/REV/controls) : CRS_design_label_nooverhangs_final.tsv MPRA1 CRS association: assoc_basic_NoOver_P28515_1001_mapq_filtered_coords_to_barcodes.pickle MPRA2 CRS design fasta: GCB_CRS_order_noverhang_KC_030924_corrected.fa MPRA2 CRS labels (FWD/REV/controls) : GCB_CRS_order_noverhang_KC_030924_final.tsv MPRA2 CRS association: assoc_hOPC_250624_mapq1_filtered_coords_to_barcodes.pickle MPRA1 Counts tables and metadata for hOPC vs Bcell analysis: MPRA1_hOPCBcell_RNADNA_counts_metadata.tar.gz MPRA1 Counts tables and metadata for hOPC Ctrl vs IFN analysis: MPRA1_hOPC_CtrlIFN_RNADNA_counts_metadata.tar.gz MPRA2 Counts tables and metadata for hOPC Ctrl vs IFN analysis: MPRA2_hOPC_CtrlIFN_RNADNA_counts_metadata.tar.gz MPRA1 Allele pairs comparisons count tables and metadata : MPRA1_hOPCCtrl_allelicCOMPPairs_counts_annot.tar.gz