Gene expression analysis of C. elegans L1 larvae fed with wild-type Pseudomonas aeruginosa CF18 and P. aeruginosa CF18 gacA mutant

To determine the genes that are differentially expressed in CF18-fed larvae and CF18 gacA-fed larvae, we performed RNA-sequencing (RNA-seq) after 4 hours and 6 hours of bacterial exposure. Larvae fed CF18 and CF18 gacA mutant were collected after 4 and 6 hours. Three biological replicates were performed for each bacterial diet and time point.