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Crosslinking/mass spectrometry analysis of Bacillus subtilis RNAP-Delta-HelD complexes

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https://www.omicsdi.org/dataset/jpost/PXD019437
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Crosslinking mass spectrometry was applied to investigate protein contacts and dramatic structural rearrangements triggered by HelD binding to RNAP. Four complexes RNAPΔδΔHelD , RNAPΔδΔHelD-δ, RNAPΔδΔHelD-HelD and RNAPΔδΔHelD-δ-HelD were assembled using RNAP purified from B. subtilis ΔhelDΔropE strain (RNAPΔδΔHelD), and recombinant δ and HelD. The four complexes were crosslinked using a heterobifunctional, photoactivatable crosslinker sulfosuccinimidyl 4,4′‐azipentanoate (sulfo-SDA). Crosslinked protein complexes were analyzed by LC-MS/MS, and crosslinked residue pairs were identified in form of crosslinked peptides.
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2020-10-26
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