Expression data from MAT1 lncRNA knockdown UM cells (OCM1a)

LncRNAs are key regulators of chromatin structure, however the mechanism of RNA-chromatin interactions are largely unclarified. Here we performed Chromatin Isolation by RNA Purification (ChIRP), using tiling oligonucleotides retrieve MAT1 lncRNA and bound DNA sequences are examined by high-throughout sequencing. ChIRP-seq enables the study of RNA regulation of chromatin and gene expression. Overall design: Chromatin Isolation by RNA Purification (ChIRP) (ChIRP-seq) for MAT1 and lacZ in OCM1a cells.