All-(heavy)-atom distances between top 20 most strongly correlated intra-protein as identified by mutual information.
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Listed are the smallest atom-atom distances (only heavy atoms, excluding side chains) for the most strongly correlated pairs of residues from the three regions PR-PR, Gag-PR, Gag-Gag ranked by MI in representative structures. For structures with multiple chains, inter-chain distances were computed and the chain and atom combinations of the smallest calculated distance for each pair are listed. aMA: matrix monomer, PDB 2H3F; MA3: matrix trimer, PDB 1HIW; CA: capsid monomer, PDB 3MGE; CA2: capsid dimer, PDB 2M8L; CA5: capsid pentamer, PDB 3P05; CA6: capsid hexamer, PDB 3MGE; NC: nucleocapsid monomer, PDB 2EXF; PR2: protease dimer, PDB 1ODW. bFor PDB files with multiple structural models, the model number with the smallest atom-atom distance is listed. All-(heavy)-atom distances between top 20 most strongly correlated intra-protein as identified by mutual information.




