Streptococcus pyogenes PopPUNK database
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下载链接:
https://figshare.com/articles/dataset/Streptococcus_pyogenes_PopPUNK_database/6931439
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资源简介:
Database for assigning cluster ID to new S. pyogenes isolates.First extract:tar xf GAS_query_v2.tar.bz2
Then assign new genomes:poppunk --assign-query --ref-db GAS_query_v2 --distances GAS_query_v2/GAS_query_v2.dists --model-dir GAS_query_v2 --q-files query.list --output GAS_assignment --threads 8
Where query.list is a list of the assemblies to assign
创建时间:
2019-08-24



