RawHash - d3_yeast_r94 (reads.fasta file)
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Basecalled sequences as extracted from the FAST5 files following NCBI link: https://trace.ncbi.nlm.nih.gov/Traces/index.html?view=run_browser&acc=SRR8648503&display=metadata The reads are extracted using the "Fast5-to-Fastq" tool (https://github.com/rrwick/Fast5-to-Fastq) with the following command: <pre><code class="language-bash">Fast5-to-Fastq/fast5_to_fastq.py fast5_files/ | awk 'BEGIN{line = 0}{line++; if(line %4 == 1){print ">"substr($1,2,36)}else if(line % 4 == 2){print $0}}' > reads.fasta</code></pre>
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Zenodo创建时间：
2023-01-29
