Identifying Spatial Co-occurrence in Healthy and InflAmed tissues (ISCHIA)
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Integrated IBD scRNASeq reference: Seurat object and cell type markers. Molecular Cartography (Resolve) data data of human colon samples. 6 ulcerative colitis colon resections: 3 inflamed, 3 non-inflamed areas (4 patients in total). Segmented object (Seurat). Visium (10X) spatial transcriptomics data of human colon samples. 4 ulcerative colitis colon resections: 2 inflamed, 2 non-inflamed areas (3 patients in total). Supplementary Table 1: positively co-occurring lignads and receptors in composition class 5.
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Zenodo创建时间：
2023-02-02
