Additional file 10 of A systems biology framework integrating GWAS and RNA-seq to shed light on the molecular basis of sperm quality in swine

Additional file 10: Table S8. Associations identified in the within trait eGWAS. Thirty-nine SNPs showed significant associations (FDR ≤ 0.05) with semen phenotypes in the GWAS and also displayed significant association with the abundance of genes which abundance correlated with the same phenotype (P-value ≤ 0.05). Chr = chromosome. FDR = False Discovery Rate; ACRO_5 = Abnormal Acrosomes 5 min; HABN = Head abnormalities.