Accurate inference of tree topologies from multiple sequence alignments using deep learning
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https://figshare.com/articles/Archives/8279618/3
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资源简介：
Each directory contains Training, Validation and Test datasets in fasta format. Directory names contain the following information about the MSAs: <br>1) Gap (w/ indels) or nogap (w/o indels) MSAs2) Number of MSAs per topology generated for training (i.e. 50k MSA * 3 possible topologies = 150k MSAs in TRAIN.fasta file) Order of topologies: 50k x ((D,A),B,C); 50k x ((D,B),A,C); 50k x ((D,C),A,B);3) MSA length (500, 1000 or 10000)4) archive3 contains Keras models and its associated trained weights. They will generate identical CNN accuracies reported in Fig. 2 <br>List of all directories:<b>archive1_gap.tar.gz</b> gap50k_1000 gap50k_10000 gap50k_500<b>archive2_nogap.tar.gz</b> nogap150k_1000 nogap300k_1000 nogap50k_1000 nogap50k_10000 nogap50k_500<b>archive3_trained_keras.tar.gz</b><br>gap50k_1000<br>nogap150k_1000nogap300k_1000nogap50k_1000<br>
提供机构：
figshare
创建时间：
2020-01-11
