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2020_CES_singlecell_ATAC - samples

NIAID Data Ecosystem2026-03-11 收录

单细胞ATAC-seq

慢性淋巴细胞白血病表观基因组

数据链接：

https://www.omicsdi.org/dataset/ega/EGAD00001005965 数据链接链接失效反馈

官方服务：

资源简介：

Single-cell ATAC-seq data for 5 CLL samples (2 controls, 3 tumor) of the CancerEpiSys-PRECiSe project.EGA dataset EGAD00001005965

应用场景：

创建时间：

2020-03-04

单细胞ATAC-seq

乳腺上皮细胞分化调控

The mammary epithelial cell (MEC) system is a bi-layered ductal epithelial network consisting of luminal and basal cells, maintained by a lineage of stem and progenitor cell populations. Here, we used

NIAID Data Ecosystem70

Signac mitochondrial vignette datasets

单细胞ATAC-seq

突变体分析

Raw mtscATAC-seq data (GSM4472969; GSM4238432) was produced by Lareau and Ludwig et al. (2020). Data was mapped to hg38 (masked NUMT) using 10x Cell Ranger ATAC (v2.1.0). Mitochondrial mutations we

Zenodo2026-04-20 更新30

Single-cell ATAC-seq integrative investigation revealing comprehensive characteristics of HIV-1-infected cells

HIV-1感染细胞表观遗传学

单细胞ATAC-seq

To comprehensively reveal the characteristics of the cells infected with human immunodeficiency virus type 1 (HIV-1), GFP-expressing HIV-1 was inoculated into a human hematopoietic stem cell-transplan

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Datasets for Lyu, Hoang, and Santiago, et al. 2021

发育基因调控

单细胞ATAC-seq

Supplemental datasets 1-14 for Lyu, Hoang, and Santiago, et al. 2021. Dataset 1: Number of cells of each type identified at each developmental age using scATAC-Seq in the mouse retina. Dataset 2: Cell

NIAID Data Ecosystem40

Multi-sample batch correction with Harmony and SnapATAC2

单细胞ATAC-seq

批次效应校正

Input datasets for the Galaxy Tutorial "Multi-sample batch correction with Harmony and SnapATAC2.

Zenodo2024-07-12 更新20