Supplementary Data for Doctoral Thesis

This repository contains the Supplementary Data for the doctoral thesis chapters 2, 3, 4 and 7.

Chapter 2 - Supplementary Tables S1 - S4

Wolfram-Schauerte M*, Pozhydaieva N*, Viering M, Glatter T, Höfer K. Integrated Omics Reveal Time-Resolved Insights into T4 Phage Infection of E. coli on Proteome and Transcriptome Levels. Viruses. 2022 Nov 12;14(11):2502. doi: 10.3390/v14112502. PMID: 36423111. 

Chapter 3 - Supplementary Tables S6 - S10

Wolfram-Schauerte M, Moskalchuk A, Pozhydaieva N, Ramírez Rojas AA, Schindler D, Kaiser S, Paczia N, Höfer K. T4 phage RNA is NAD-capped and alters the NAD-cap epitranscriptome of Escherichia coli during infection through a phage-encoded decapping enzyme. bioRxiv. 2024. doi: 10.1101/2024.04.04.588121.

Chapter 4 - Supplementary Figure 1 and Supplementary Tables 1 - 6

Wolfram-Schauerte M*, Pozhydaieva N, Grawenhoff J, Welp LM, Silbern I, Wulf A, Billau FA, Glatter T, Urlaub H, Jäschke A, Höfer K*. A viral ADP-ribosyltransferase attaches RNA chains to host proteins. Nature. 2023 Aug;620(7976):1054-1062. doi: 10.1038/s41586-023-06429-2. Epub 2023 Aug 16. PMID: 37587340.

Chapter 7 - Supplementary Table 1

Pozhydaieva N*, Wolfram-Schauerte M*, Keuthen H, Höfer K. The enigmatic epitranscriptome of bacteriophages: putative RNA modifications in viral infections. Curr Opin Microbiol. 2024 Feb;77:102417. doi: 10.1016/j.mib.2023.102417. Epub 2024 Jan 13. PMID: 38217927.