Data from: High-throughput identification of informative nuclear loci for shallow-scale phylogenetics and phylogeography

Lemmon_Lemmon_Supplemental_Tables_16Nov2011MtDNALociFinalNuclearLoci_ECM7144FinalNuclearLoci_ECM7210FinalNuclearLoci_ECM7278FinalNuclearLoci_ECM7144_ECM7210FinalNuclearLoci_ECM7144_ECM7278FinalNuclearLoci_ECM7210_ECM7278FinalNuclearLoci_ECM7144_ECM7210_ECM7278ReadMeVerifiedNuclearLociRRL_AnalysisScriptsPython scripts used to produce alleles from raw Illumina data.InSilicoPredictionPrograms used to predict the number loci given a particular restriction site. The first program (GetCutterFragLens.java) is first used to generate an expected fragment length distribution (from an uninterleaved fasta file). The second program PredictNLoci.r is used to determine the number of loci contained within a specified size range.All_Primers_And_PCR_Results_LocusBySpeciesThis file contains the primer sequences for all loci tested, as well as the results we obtained for each locus x species combination tested.PCR_Results_LocusBySpecies.xlsxSupplementalFigures