Epigenetic Divergence during Early Stages of Speciation in an African Crater Lake Cichlid Fish

Inheritance and plasticity of epigenetic divergence characterise early stages of speciation in an incipient cichlid species of an African crater lake. Wild-caught (wild) or common garden (tank-reared) adult male specimens for all datasets. RNAseq: 4-5 biological replicates per population; WGBS: 2-3 biological replicates per population: RRBS: 11-12 biological replicates per population. -- Processed files: gene/transcript count matrix (in tpm; RNAseq) and bigwig files (averaged mCG/CG levels per groups across 50bp-long non-sliding windows genome-wide).