Hi-C of head and neck cell lines

NIAID Data Ecosystem2026-04-30 收录

染色质构象

头颈部癌症细胞系

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP392371 数据链接链接失效反馈

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资源简介：

We comprehensively analysed chromatin interactions in UPCI-SCC-090, UM-SCC-47, UM-SCC-104, FaDu and NP69SV40T by performing Hi-C. Overall design: Comprehensive chromatin conformational analysis using Hi-C

创建时间：

2023-01-31

Additional file 4 of Multiplexed capture of spatial configuration and temporal dynamics of locus-specific 3D chromatin by biotinylated dCas9

三维基因组学

染色质构象

Additional file 4:Table S3. List of identified locus-specific chromatin interactions at β-globin LCR. The list of locus-specific inter- and intra-chromosomal DNA interactions identified by multiplexed

NIAID Data Ecosystem40

SAM domain polymerization links subnuclear clustering of PRC1 to silencing detected using expression data and ChIP experiments

表观遗传调控

染色质构象

Polycomb group (PcG) proteins mediate heritable but reversible silencing of developmental regulator genes by modifying their chromatin configuration. Accumulating evidence documents a role for PcG pro

NIAID Data Ecosystem20

3D chromatin organization involving MEIS1 factor in the cis-regulatory landscape of GJB2

染色质构象

基因顺式调控

To study GJB2 gene regulation, we used Circular Chromosome Conformation Capture technique (4C) to analyse chromatin interactions inside DFNB1 locus. Overall design: We used two viewpoints, GJB2 promot

NIAID Data Ecosystem10

Promoter Capture-C analysis of Hepatocyte-like cells

染色质构象

细胞分化模型

The goal of this study is to identify chromatin interactions in hepatocyte-like cells Overall design: Methods: hepatocyte-like cells (HLC) were produced by differentiating three biological replicates

NIAID Data Ecosystem20

Eight in situ Hi-C experiments of mouse OG2 stem cells for 7 different starting material and that were digested by either HindIII (2 samples) or MboI (6 samples) restriction enzymes

染色质构象

细胞表观遗传学

In this experiment, we've examined chromatin conformation of OG2 (B6; CBA-Tg(Pou5f1-EGFP)2Mnn/J; stock number 004654) mouse stem cells cultured as described in (Shi et al., 2008), using different amou

NIAID Data Ecosystem10

Hi-C of head and neck cell lines

资源简介：

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