Supplementary Data S12 - PRO-seq gene body analysis

Supplementary Data S12 of the manuscript "Hypoxia leads to reduced mito-nuclear gene expression and to increased mtDNA transcriptional pausing in human cells" by Shtolz et al.Result of DESeq2 analysis on PRO-seq data analyzed using PEPPR."result" output. Main columns:Name: gene symbolbaseMean: Mean normalized expression across all sampleslog2FoldChange: log2 fold-change between treatment (hypoxia) and control (normoxia).lfcSE: Standard error of the log2 fold-changestat: Negative binomial test statistic.p-valuepadj: Benjamin-Hodgkin-adjusted p-valuedataset: Name of the datasetcell lineComplex: Complex association of gene (either complex I, II, III, IV and V of OXPHOS or the mito-ribosome)Genome: Genome of the gene (NUC for nucleus or MT for mitochondrial DNA).ensembl.gene: Ensemble gene ID.Data used to generate Supplementary Fig. S11.