Trinity contigs
收藏Figshare2017-10-12 更新2026-04-08 收录
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https://figshare.com/articles/dataset/Trinity_contigs/5436202/1
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资源简介：
This repository contains multifasta files of contiguous sequences that were in silico assembled by the Trinity de novo assembler algorithm. The high-quality RNA-Seq reads that were used as input originate from raw NGS read files deposited under the BioProject PRJNA411946. <br><br>The command line script which calls the Trinity software is given below.<br><br>#!/bin/bash#assemble reads using Trinity#--max_memory 15G --CPU 10<br>export PATH=$PATH:/work/kschoonv/bowtie-1.1.2/<br>cd /work/kschoonv/trinityrnaseq-2.2.0/time ./Trinity --seqType fq --left ~/*left.fastq.gz --right ~/*right.fastq.gz --max_memory 12G --CPU 8 --output ks00q005l50_trinity<br>
创建时间：
2017-10-12
